S
Bioinformatics Engineer - Services
Seqera
Contract type
Ongoing
Work mode
100% remote
Experience
Mid-level · 4+ years
Job description
Key details
- Create robust and reproducible scientific workflows using Nextflow, making them available to customers to analyze and visualize data
- Develop and deliver solutions to increase adoption of Seqera products in the customer base
- Develop, deploy, and maintain cloud data infrastructures capable of processing data related to next-generation sequencing (NGS), imaging analysis, machine learning and related large datasets
- Understand the biological application and scientific needs underlying relevant scientific workflows
- Clearly communicate updates on services delivery, including project plans, requirements, deliverables, documentation, and training, through both writing and presentations
- Engage with customers on requirements, developing project deliverables and coordinating the execution of projects
- Train customers to use Seqera products
- Represent the voice of the customer and collaborate internally with content, research, and software development teams
- Company mission
- Information not specified
Primary stack
Core technologies
Python (Programming Language)AWSAzureGoogle Cloud Platform (GCP)
Benefits
- Information not specified
Requirements & details
- Strong knowledge of the Nextflow language and the pipeline development approaches adopted by nf-core
- Experience with programming in languages such as Groovy, Python and R
- Ability to effectively communicate and clearly explain technology to different audiences, through code, writing, presentations and demos
- Use of AI for software development and scientific analysis
- Use of Git or other version control systems in a software development environment
- In-depth experience with analysis pipelines and algorithms for a variety of 'omics' data types, such as genomics, proteomics, metabolomics etc
- Experience with HPC and public cloud (AWS, Google, Azure) architectures and a willingness to learn more
- A customer-oriented attitude, someone who enjoys working with others and helping find solutions
- PhD in bioinformatics or a relevant field or Masters + 3 years experience
- 4+ years experience relevant to scientific workflows and software development
- Experience with orchestrated, and maintained data infrastructures and scalable pipelines for large datasets
- Solid track record of production level code in bioinformatics as evidenced by public code repositories, publications, contributions to open source
- Self-motivated and a proactive thinker – can work independently and in teams
- Great interpersonal and communication skills
- Critical thinker and problem-solving skills
- An eye for detail and well organized
- Creativity & curiosity across all solutions given to clients
- Nextflow, Groovy, Python, R, Git, AWS, Google Cloud, Azure
- Python (Programming Language)
- AWS
- Azure
- Google Cloud Platform (GCP)